Transcript: lnc-TARBP1-1:4

Basic information

LNCipedia transcript ID: lnc-TARBP1-1:4 
LNCipedia gene ID: lnc-TARBP1-1
Location (hg38): chr1:234366999-234373652
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6630 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231663.1|MICT00000033088.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.7051 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TARBP1-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TARBP1-1:4
5.0 lnc-TARBP1-1:4
5.1 lnc-SIPA1L2-28:2
5.2 lnc-TARBP1-1:4