Transcript: lnc-TAOK1-8:2

Basic information

LNCipedia transcript ID: lnc-TAOK1-8:2 
LNCipedia gene ID: lnc-TAOK1-8
Location (hg38): chr17:29567548-29568660
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 816 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025885; NONHSAT052716
Alternative gene names: XLOC_012161; linc-TP53I13


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.0405 non-coding 
CPAT coding probability 7.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAOK1-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TP53I13-1:2
3.1 lnc-TP53I13-1:2
4.0 lnc-TP53I13-1:2
4.1 lnc-TP53I13-8:4
5.0 lnc-TP53I13-8:4
5.1 lnc-PIPOX-37:4
5.2 lnc-TAOK1-8:2