Transcript: lnc-TANK-4:3

Basic information

LNCipedia transcript ID: lnc-TANK-4:3 
LNCipedia gene ID: lnc-TANK-4
Location (hg38): chr2:160953073-160962575
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5644 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_1978_chr2:161809583-161812064_liver
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.6835 non-coding 
CPAT coding probability 2.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TANK-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TANK-4:3
4.0 lnc-TANK-4:3
4.1 lnc-TANK-4:3
5.0 lnc-TANK-4:3
5.1 lnc-TANK-4:3
5.2 lnc-TANK-4:3