Transcript: lnc-TAF7-2:1

Basic information

LNCipedia transcript ID: lnc-TAF7-2:1 
LNCipedia gene ID: lnc-TAF7-2
Ensembl Gene ID: ENSG00000280026
Ensembl Transcript ID: ENST00000625053
Location (hg38): chr5:141350109-141350662
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 554 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000625053.1
Alternative gene names: ENSG00000280026.1; AC005618.8; AC005618.4; AC005618.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -111.1926 non-coding 
CPAT coding probability 1.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAF7-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TAF7-2:1
4.1 lnc-TAF7-2:1
5.0 lnc-TAF7-2:1
5.1 lnc-DIAPH1-8:1
5.2 lnc-TAF7-2:1