Transcript: lnc-TACR1-1:4

Basic information

LNCipedia transcript ID: lnc-TACR1-1:4 
LNCipedia gene ID: lnc-TACR1-1
Location (hg38): chr2:74911402-74958879
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 47431 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236209.1|ENCT00000244173.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.4302 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TACR1-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TACR1-1:4
5.0 lnc-TACR1-1:4
5.1 lnc-GKN2-174:2
5.2 lnc-TACR1-1:4