Transcript: lnc-SYNM-9:1

Basic information

LNCipedia transcript ID: lnc-SYNM-9:1 
LNCipedia gene ID: lnc-SYNM-9
Location (hg38): chr15:98676521-98681880
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 345 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1245_chr15:99219749-99225109_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.9717 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SYNM-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SYNM-7:1
4.0 lnc-SYNM-7:1
4.1 lnc-SYNM-7:1
5.0 lnc-SYNM-7:1
5.1 lnc-ARRDC4-16:1
5.2 lnc-SYNM-9:1