Transcript: lnc-SYNJ2BP-1:3

Basic information

LNCipedia transcript ID: lnc-SYNJ2BP-1:3 
LNCipedia gene ID: lnc-SYNJ2BP-1
Location (hg38): chr14:70326068-70328230
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 447 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT037557
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -193.6112 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SYNJ2BP-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SYNJ2BP-1:3
4.0 lnc-SYNJ2BP-1:3
4.1 lnc-SYNJ2BP-1:3
5.0 lnc-SYNJ2BP-1:3
5.1 lnc-ABCD4-60:5
5.2 lnc-SYNJ2BP-1:3