Transcript: lnc-SWT1-6:1

Basic information

LNCipedia transcript ID: lnc-SWT1-6:1 
LNCipedia gene ID: lnc-SWT1-6
Location (hg38): chr1:185421057-185422917
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1861 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000028030.1|FTMT20400008432.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -103.3105 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SWT1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SWT1-6:1
5.0 lnc-SWT1-6:1
5.1 lnc-C1orf21-17:1
5.2 lnc-SWT1-6:1