Transcript: lnc-STX19-1:1

Basic information

LNCipedia transcript ID: lnc-STX19-1:1 
LNCipedia gene ID: lnc-STX19-1
Location (hg38): chr3:93906040-93911157
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 643 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT090718
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.1368 non-coding 
CPAT coding probability 4.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STX19-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STX19-1:1
4.0 lnc-STX19-1:1
4.1 lnc-STX19-1:1
5.0 lnc-STX19-1:1
5.1 lnc-GABRR3-17:1
5.2 lnc-STX19-1:1