Transcript: lnc-STARD9-1:1

Basic information

LNCipedia transcript ID: lnc-STARD9-1:1 
LNCipedia gene ID: lnc-STARD9-1
Location (hg38): chr15:42737203-42742191
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4047 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000500850; NONHSAT042028
Alternative gene names: ENSG00000246283; AC090510.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.2065 non-coding 
CPAT coding probability 3.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STARD9-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-STARD9-1:1
3.1 lnc-STARD9-1:1
4.0 lnc-STARD9-1:1
4.1 lnc-STARD9-1:1
5.0 lnc-STARD9-1:1
5.1 lnc-TMEM62-4:1
5.2 lnc-STARD9-1:1