Transcript: lnc-SSTR4-2:13

Basic information

LNCipedia transcript ID: lnc-SSTR4-2:13 
LNCipedia gene ID: lnc-SSTR4-2
Location (hg38): chr20:23187961-23190409
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 821 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230387.1|MICT00000215165.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 23.0217 non-coding 
CPAT coding probability 2.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SSTR4-2:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SSTR4-2:13
5.0 lnc-SSTR4-2:13
5.1 lnc-CST8-9:10
5.2 lnc-SSTR4-2:13