Transcript: lnc-SRY-4:1

Basic information

LNCipedia transcript ID: lnc-SRY-4:1 
LNCipedia gene ID: lnc-SRY-4
Location (hg38): chrY:2334295-2336410
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 651 bp
Exons: 2
Sources: Gencode v13; NONCODE v4
Alternative transcript names: ENSTR0000437244.1; DHRSX-IT1-001; OTTHUMT00000144311.1; NONHSAT139277
Alternative gene names: ENSGR0000223571.1; DHRSX-IT1; OTTHUMG00000067406.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.4163 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRY-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRY-4:1
4.0 lnc-SRY-4:1
4.1 lnc-SRY-4:1
5.0 lnc-SRY-4:1
5.1 lnc-DAZ1-159:1
5.2 lnc-SRY-4:1