Transcript: lnc-SRSF2-2:9

Basic information

LNCipedia transcript ID: lnc-SRSF2-2:9 
LNCipedia gene ID: lnc-SRSF2-2
Ensembl Gene ID: ENSG00000267521
Ensembl Transcript ID: ENST00000591422
Location (hg38): chr17:76957023-76958222
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 722 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT056099; ENST00000591422.1
Alternative gene names: ENSG00000267521.1; RP11-87G24.6; AC016168.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -296.6267 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRSF2-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRSF2-5:1
4.0 lnc-SRSF2-5:1
4.1 lnc-SRSF2-2:9
5.0 lnc-SRSF2-2:9
5.1 lnc-ST6GALNAC2-17:10
5.2 lnc-SRSF2-2:9