Transcript: lnc-SRSF11-1:2

Basic information

LNCipedia transcript ID: lnc-SRSF11-1:2 
LNCipedia gene ID: lnc-SRSF11-1
Location (hg38): chr1:70141382-70144364
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2983 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000565615.1; RP4-677H15.6-001; OTTHUMT00000431172.1; NONHSAT003843
Alternative gene names: ENSG00000261223.1; RP4-677H15.6; OTTHUMG00000175846.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -82.1075 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRSF11-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC7-1:1
4.0 lnc-LRRC7-1:1
4.1 lnc-LRRC7-1:1
5.0 lnc-LRRC7-1:1
5.1 lnc-CTH-1:5
5.2 lnc-SRSF11-1:2