Transcript: lnc-SPNS2-4:1

Basic information

LNCipedia transcript ID: lnc-SPNS2-4:1 
LNCipedia gene ID: lnc-SPNS2-4
Location (hg38): chr17:4555503-4556542
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1040 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262921.1|ENCT00000171225.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -144.4919 non-coding 
CPAT coding probability 1.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPNS2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SPNS2-4:1
5.0 lnc-SPNS2-4:1
5.1 lnc-RPA1-83:1
5.2 lnc-SPNS2-4:1