Transcript: lnc-SPATA31D4-1:6

Basic information

LNCipedia transcript ID: lnc-SPATA31D4-1:6 
LNCipedia gene ID: lnc-SPATA31D4-1
Location (hg38): chr9:81689829-81755842
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1676 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233926.1|MICT00000360969.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -34.7924 non-coding 
CPAT coding probability 3.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA31D4-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM75D1-1:9
5.0 lnc-FAM75D1-1:9
5.1 lnc-SECISBP2-91:6
5.2 lnc-SPATA31D4-1:6