Transcript: lnc-SPATA19-1:9

Basic information

LNCipedia transcript ID: lnc-SPATA19-1:9 
LNCipedia gene ID: lnc-SPATA19-1
Location (hg38): chr11:133909183-133912118
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 328 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT025220
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA19-1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-259P6.1.1-1:2
4.0 lnc-RP11-259P6.1.1-1:2
4.1 lnc-RP11-259P6.1.1-1:2
5.0 lnc-RP11-259P6.1.1-1:2
5.1 lnc-NCAPD3-7:2
5.2 lnc-SPATA19-1:9