Transcript: lnc-SPAG16-7:6

Basic information

LNCipedia transcript ID: lnc-SPAG16-7:6 
LNCipedia gene ID: lnc-SPAG16-7
Location (hg38): chr2:213151925-213186712
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 657 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270659.1|MICT00000206987.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -93.0286 non-coding 
CPAT coding probability 5.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPAG16-7:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SPAG16-7:6
5.0 lnc-SPAG16-7:6
5.1 lnc-CPS1-30:4
5.2 lnc-SPAG16-7:6