Transcript: lnc-SPAG1-7:2

Basic information

LNCipedia transcript ID: lnc-SPAG1-7:2 
LNCipedia gene ID: lnc-SPAG1-7
Location (hg38): chr8:100721702-100722068
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 367 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000099974.1|HBMT00001398540.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPAG1-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SPAG1-7:2
5.0 lnc-SPAG1-7:2
5.1 lnc-CA2-166:2
5.2 lnc-SPAG1-7:2