Transcript: lnc-SPACA1-3:1

Basic information

LNCipedia transcript ID: lnc-SPACA1-3:1 
LNCipedia gene ID: lnc-SPACA1-3
Location (hg38): chr6:88172261-88175762
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3502 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT113927
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.9012 non-coding 
CPAT coding probability 9.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPACA1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPACA1-3:1
4.0 lnc-SPACA1-3:1
4.1 lnc-SPACA1-3:1
5.0 lnc-SPACA1-3:1
5.1 lnc-ZNF292-24:1
5.2 lnc-SPACA1-3:1