Transcript: lnc-SP9-11:1

Basic information

LNCipedia transcript ID: lnc-SP9-11:1 
LNCipedia gene ID: lnc-SP9-11
Location (hg38): chr2:174248733-174250135
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1403 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000045568.1|ENCT00000232173.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -145.0773 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SP9-11:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SP9-11:1
5.0 lnc-SP9-11:1
5.1 lnc-UBR3-54:1
5.2 lnc-SP9-11:1