Transcript: lnc-SP110-8:4

Basic information

LNCipedia transcript ID: lnc-SP110-8:4 
LNCipedia gene ID: lnc-SP110-8
Location (hg38): chr2:230440435-230513290
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3667 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000051830.1|MICT00000209373.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.9003 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SP110-8:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SP110-8:4
5.0 lnc-SP110-8:4
5.1 lnc-HTR2B-8:2
5.2 lnc-SP110-8:4