Transcript: lnc-SNX31-1:3

Basic information

LNCipedia transcript ID: lnc-SNX31-1:3 
LNCipedia gene ID: lnc-SNX31-1
Location (hg38): chr8:100550724-100551713
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 990 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT128008
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.2101 non-coding 
CPAT coding probability 12.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNX31-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNX31-1:3
4.0 lnc-SNX31-1:3
4.1 lnc-SNX31-1:3
5.0 lnc-SNX31-1:3
5.1 lnc-ZNF706-26:3
5.2 lnc-SNX31-1:3