Transcript: lnc-SNX19-7:1

Basic information

LNCipedia transcript ID: lnc-SNX19-7:1 
LNCipedia gene ID: lnc-SNX19-7
Location (hg38): chr11:130564430-130758600
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 571 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000538996; NONHSAT025134
Alternative gene names: ENSG00000255658; AP003486.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.2585 non-coding 
CPAT coding probability 4.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNX19-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-890B15.2.1-4:1
3.1 lnc-RP11-890B15.2.1-4:1
4.0 lnc-RP11-890B15.2.1-4:1
4.1 lnc-RP11-890B15.2.1-4:1
5.0 lnc-RP11-890B15.2.1-4:1
5.1 lnc-ADAMTS8-6:1
5.2 lnc-SNX19-7:1