Transcript: lnc-SNX19-3:2

Basic information

LNCipedia transcript ID: lnc-SNX19-3:2 
LNCipedia gene ID: lnc-SNX19-3
Location (hg38): chr11:130772771-130776780
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 379 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019805; NONHSAT025143
Alternative gene names: XLOC_009605; linc-ADAMTS8-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -447.6725 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNX19-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-890B15.2.1-3:1
3.1 lnc-RP11-890B15.2.1-3:1
4.0 lnc-RP11-890B15.2.1-3:1
4.1 lnc-RP11-890B15.2.1-3:1
5.0 lnc-RP11-890B15.2.1-3:1
5.1 lnc-ADAMTS8-8:1
5.2 lnc-SNX19-3:2