Transcript: lnc-SNX17-1:11

Basic information

LNCipedia transcript ID: lnc-SNX17-1:11 
LNCipedia gene ID: lnc-SNX17-1
Location (hg38): chr2:27357140-27358190
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 536 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234072.1|ENST00000453289.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.7744 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNX17-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SNX17-1:11
5.0 lnc-SNX17-1:11
5.1 lnc-SNX17-1:11
5.2 lnc-SNX17-1:11