Transcript: lnc-SNX16-4:1

Basic information

LNCipedia transcript ID: lnc-SNX16-4:1 
LNCipedia gene ID: lnc-SNX16-4
Location (hg38): chr8:82271121-82323078
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 360 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_3635_chr8:83183355-83235313_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.9766 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNX16-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNX16-4:1
4.0 lnc-SNX16-4:1
4.1 lnc-SNX16-4:1
5.0 lnc-SNX16-4:1
5.1 lnc-CPA6-166:1
5.2 lnc-SNX16-4:1