Transcript: lnc-SNU13-3:1

Basic information

LNCipedia transcript ID: lnc-SNU13-3:1 
LNCipedia gene ID: lnc-SNU13-3
Location (hg38): chr22:41793832-41800519
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6622 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000058727.1|ENCT00000283191.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.8786 non-coding 
CPAT coding probability 14.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNU13-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NHP2L1-3:1
5.0 lnc-NHP2L1-3:1
5.1 lnc-SHISA8-4:1
5.2 lnc-SNU13-3:1