Transcript: lnc-SNRPB2-2:7

Basic information

LNCipedia transcript ID: lnc-SNRPB2-2:7 
LNCipedia gene ID: lnc-SNRPB2-2
Location (hg38): chr20:16573540-16582690
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4528 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000052754.1|ENCT00000259686.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.0911 non-coding 
CPAT coding probability 0.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNRPB2-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SNRPB2-2:7
5.0 lnc-SNRPB2-2:7
5.1 lnc-CFAP61-45:5
5.2 lnc-SNRPB2-2:7