Transcript: lnc-SMOC2-7:3

Basic information

LNCipedia transcript ID: lnc-SMOC2-7:3 
LNCipedia gene ID: lnc-SMOC2-7
RefSeq ID: NR_134619
Location (hg38): chr6:169067786-169069424
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 433 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134619.1
Alternative gene names: LOC102724357


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -125.9141 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMOC2-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SYTL3-113:1
5.1 lnc-SYTL3-113:1
5.2 lnc-SMOC2-7:3