Transcript: lnc-SMIM36-6:1

Basic information

LNCipedia transcript ID: lnc-SMIM36-6:1 
LNCipedia gene ID: lnc-SMIM36-6
Location (hg38): chr17:55420092-55421797
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 570 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT054811
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -108.1941 non-coding 
CPAT coding probability 49.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SMIM36-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM100-6:1
4.0 lnc-TMEM100-6:1
4.1 lnc-TMEM100-6:1
5.0 lnc-TMEM100-6:1
5.1 lnc-PTRH2-68:1
5.2 lnc-SMIM36-6:1