Transcript: lnc-SMIM30-1:4

Basic information

LNCipedia transcript ID: lnc-SMIM30-1:4 
LNCipedia gene ID: lnc-SMIM30-1
Location (hg38): chr7:113117003-113118560
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 910 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT122815
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 748.4449 coding 
CPAT coding probability 12.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SMIM30-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR85-2:3
4.0 LINC00998:4
4.1 LINC00998:4
5.0 LINC00998:4
5.1 lnc-TFEC-33:4
5.2 lnc-SMIM30-1:4