Transcript: lnc-SMIM10L2B-1:11

Basic information

LNCipedia transcript ID: lnc-SMIM10L2B-1:11 
LNCipedia gene ID: lnc-SMIM10L2B-1
Location (hg38): chrX:135095113-135098358
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 471 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000455568
Alternative gene names: ENSG00000196972; NCRNA00087


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.8018 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMIM10L2B-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM127B-1:3
3.1 lnc-FAM127B-1:4
4.0 lnc-FAM127B-1:4
4.1 lnc-FAM127B-1:4
5.0 lnc-FAM127B-1:4
5.1 lnc-ETDB-4:11
5.2 lnc-SMIM10L2B-1:11