Transcript: lnc-SMAD2-3:17

Basic information

LNCipedia transcript ID: lnc-SMAD2-3:17 
LNCipedia gene ID: lnc-SMAD2-3
Location (hg38): chr18:48040909-48165331
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 543 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT059181
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 89.59% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SMAD2-3:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SMAD2-3:6
4.0 lnc-ZBTB7C-3:6
4.1 lnc-ZBTB7C-3:6
5.0 lnc-ZBTB7C-3:6
5.1 lnc-SMAD2-3:11
5.2 lnc-SMAD2-3:17