Transcript: lnc-SLX4IP-4:3

Basic information

LNCipedia transcript ID: lnc-SLX4IP-4:3 
LNCipedia gene ID: lnc-SLX4IP-4
Location (hg38): chr20:10695126-10701717
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 337 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_2069_chr20:10675773-10682365_prostate
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.8726 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLX4IP-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C20orf94-4:1
4.0 lnc-C20orf94-4:1
4.1 lnc-C20orf94-4:1
5.0 lnc-C20orf94-4:1
5.1 lnc-SLX4IP-4:1
5.2 lnc-SLX4IP-4:3