Transcript: lnc-SLK-1:1

Basic information

LNCipedia transcript ID: lnc-SLK-1:1 
LNCipedia gene ID: lnc-SLK-1
Location (hg38): chr10:103922910-103923812
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 360 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018319; NONHSAT016215
Alternative gene names: XLOC_008597; linc-SLK-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -153.1004 non-coding 
CPAT coding probability 2.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLK-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLK-1:1
3.1 lnc-SLK-1:1
4.0 lnc-SLK-1:1
4.1 lnc-SLK-1:1
5.0 lnc-SLK-1:1
5.1 lnc-SMC3-69:1
5.2 lnc-SLK-1:1