Transcript: lnc-SLITRK6-21:1

Basic information

LNCipedia transcript ID: lnc-SLITRK6-21:1 
LNCipedia gene ID: lnc-SLITRK6-21
Location (hg38): chr13:88903909-88906330
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 771 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_897_chr13:89556162-89558584_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.8564 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLITRK6-21:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLITRK6-21:1
4.0 lnc-SLITRK6-21:1
4.1 lnc-SLITRK6-21:1
5.0 lnc-SLITRK6-21:1
5.1 lnc-IRS2-109:1
5.2 lnc-SLITRK6-21:1