Transcript: lnc-SLCO2A1-4:1

Basic information

LNCipedia transcript ID: lnc-SLCO2A1-4:1 
LNCipedia gene ID: lnc-SLCO2A1-4
Location (hg38): chr3:134152644-134154268
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1625 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT092227
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -190.0582 non-coding 
CPAT coding probability 3.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLCO2A1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLCO2A1-2:1
4.0 lnc-SLCO2A1-2:1
4.1 lnc-SLCO2A1-2:1
5.0 lnc-SLCO2A1-2:1
5.1 lnc-ANAPC13-8:1
5.2 lnc-SLCO2A1-4:1