Transcript: lnc-SLC4A1-6:1

Basic information

LNCipedia transcript ID: lnc-SLC4A1-6:1 
LNCipedia gene ID: lnc-SLC4A1-6
Ensembl Gene ID: ENSG00000285486
Ensembl Transcript ID: ENST00000642861
Location (hg38): chr17:44276368-44281182
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4061 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642861.1
Alternative gene names: ENSG00000285486.1; AC003043.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.7913 non-coding 
CPAT coding probability 3.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC4A1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GPATCH8-6:1
5.1 lnc-GPATCH8-6:1
5.2 lnc-SLC4A1-6:1