Transcript: lnc-SLC47A1-4:1

Basic information

LNCipedia transcript ID: lnc-SLC47A1-4:1 
LNCipedia gene ID: lnc-SLC47A1-4
Location (hg38): chr17:19602259-19603208
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 950 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT146505
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.1561 non-coding 
CPAT coding probability 9.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC47A1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC47A1-4:1
4.0 lnc-SLC47A1-4:1
4.1 lnc-SLC47A1-4:1
5.0 lnc-SLC47A1-4:1
5.1 lnc-PIPOX-132:1
5.2 lnc-SLC47A1-4:1