Transcript: lnc-SLC38A8-4:5

Basic information

LNCipedia transcript ID: lnc-SLC38A8-4:5 
LNCipedia gene ID: lnc-SLC38A8-4
Location (hg38): chr16:83735033-83772868
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 946 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT144009
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.5551 non-coding 
CPAT coding probability 7.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC38A8-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC38A8-4:5
4.0 lnc-SLC38A8-4:5
4.1 lnc-SLC38A8-4:5
5.0 lnc-SLC38A8-4:5
5.1 lnc-MTHFSD-58:4
5.2 lnc-SLC38A8-4:5