Transcript: lnc-SLC38A5-1:4

Basic information

LNCipedia transcript ID: lnc-SLC38A5-1:4 
LNCipedia gene ID: lnc-SLC38A5-1
RefSeq ID: NR_135596
Location (hg38): chrX:48506526-48508839
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 651 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135596.1
Alternative gene names: LOC101927635


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -205.142 non-coding 
CPAT coding probability 3.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC38A5-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PCSK1N-9:3
5.1 lnc-PCSK1N-9:3
5.2 lnc-SLC38A5-1:4