Transcript: lnc-SLC37A4-1:28

Basic information

LNCipedia transcript ID: lnc-SLC37A4-1:28 
LNCipedia gene ID: lnc-SLC37A4-1
Location (hg38): chr11:119024878-119030872
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1472 bp
Exons: 10
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000530407.1; SLC37A4-012; OTTHUMT00000389668.1
Alternative gene names: ENSG00000137700.10; SLC37A4; OTTHUMG00000166352.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 2763.2951 coding 
CPAT coding probability 99.82% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC37A4-1:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPS25-1:7
4.0 lnc-RPS25-1:7
4.1 lnc-RPS25-1:7
5.0 lnc-RPS25-1:7
5.1 lnc-SLC37A4-1:8
5.2 lnc-SLC37A4-1:28