Transcript: lnc-SLC35A3-1:3

Basic information

LNCipedia transcript ID: lnc-SLC35A3-1:3 
LNCipedia gene ID: lnc-SLC35A3-1
Location (hg38): chr1:100030566-100035632
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5057 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT004775
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.0123 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC35A3-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HIAT1-1:2
4.0 lnc-HIAT1-1:2
4.1 lnc-HIAT1-1:2
5.0 lnc-HIAT1-1:2
5.1 lnc-SLC30A7-31:2
5.2 lnc-SLC35A3-1:3