Transcript: lnc-SLC2A10-9:6

Basic information

LNCipedia transcript ID: lnc-SLC2A10-9:6 
LNCipedia gene ID: lnc-SLC2A10-9
Location (hg38): chr20:46432689-46446156
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3670 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT080017
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 33.8621 non-coding 
CPAT coding probability 5.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC2A10-9:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC2A10-10:1
4.0 lnc-SLC2A10-10:1
4.1 lnc-SLC2A10-9:6
5.0 lnc-SLC2A10-9:6
5.1 lnc-STK4-43:4
5.2 lnc-SLC2A10-9:6