Transcript: lnc-SLC26A3-1:17

Basic information

LNCipedia transcript ID: lnc-SLC26A3-1:17 
LNCipedia gene ID: lnc-SLC26A3-1
Location (hg38): chr7:107742969-107744025
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 528 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000241764.3|ENST00000609979.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -64.1579 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC26A3-1:17 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC26A3-1:17
5.0 lnc-SLC26A3-1:17
5.1 lnc-NRCAM-10:14
5.2 lnc-SLC26A3-1:17