Transcript: lnc-SLC25A48-8:2

Basic information

LNCipedia transcript ID: lnc-SLC25A48-8:2 
LNCipedia gene ID: lnc-SLC25A48-8
Location (hg38): chr5:135399287-135401296
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2010 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270021.1|ENST00000602502.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -124.097 non-coding 
CPAT coding probability 7.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC25A48-8:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CTC-203F4.1.1-3:3
5.0 lnc-CTC-203F4.1.1-3:3
5.1 lnc-PDLIM4-74:2
5.2 lnc-SLC25A48-8:2