Transcript: lnc-SLC22A5-6:8

Basic information

LNCipedia transcript ID: lnc-SLC22A5-6:8 
LNCipedia gene ID: lnc-SLC22A5-6
Location (hg38): chr5:132470532-132476010
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 867 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT103755
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -215.3815 non-coding 
CPAT coding probability 8.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC22A5-6:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC22A5-2:3
4.0 lnc-C5orf56-2:3
4.1 lnc-C5orf56-2:3
5.0 lnc-C5orf56-2:3
5.1 lnc-PDLIM4-6:9
5.2 lnc-SLC22A5-6:8