Transcript: lnc-SLC18A1-3:6

Basic information

LNCipedia transcript ID: lnc-SLC18A1-3:6 
LNCipedia gene ID: lnc-SLC18A1-3
Location (hg38): chr8:19506037-19532020
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 296 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT125378
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC18A1-3:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PSD3-3:7
4.0 lnc-SLC18A1-3:6
4.1 lnc-SLC18A1-3:6
5.0 lnc-SLC18A1-3:6
5.1 lnc-EGR3-33:6
5.2 lnc-SLC18A1-3:6