Transcript: lnc-SLC18A1-3:4

Basic information

LNCipedia transcript ID: lnc-SLC18A1-3:4 
LNCipedia gene ID: lnc-SLC18A1-3
Location (hg38): chr8:19585286-19602224
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 577 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT125380
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.0339 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC18A1-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PSD3-3:6
4.0 lnc-SLC18A1-3:4
4.1 lnc-SLC18A1-3:4
5.0 lnc-SLC18A1-3:4
5.1 lnc-EGR3-33:4
5.2 lnc-SLC18A1-3:4